But let your communication be Yea, yea; Nay, nay: for whatsoever is more than these cometh of evil
Thursday, July 26th, 2012

Bekanntmachung zur Aufhebung der Bekanntmachung

received that today / das kam heute morgen an

Wednesday, July 18th, 2012

An enormous step forward in whole genome sequencing

The idea might not be new – we already diluted DNA already a decade ago ( see this 2003 paper ). A new Nature paper by Peters ( Accurate whole-genome sequencing and haplotyping from 10 to 20 human cells… ) now shows that diluting DNA into 384 wells, adding unique tags, and pooling again before sequencing everything on a Hiseq, will result in an enormous reduction of sequencing errors – a problem that we are fighting now for a year. IMHO the paper isn’t primarily about the low number of cells that can be sequenced, but also about error reduction in WGS. The two key facts are certainly

To ensure complete representation of the genome we maximized the input of DNA fragments for a given read coverage and number of aliquots. Unlike other experimental approaches this resulted in low- coverage read data for each fragment in each of the wells a fragment is found in.

plus an intelligent phasing algorithm (Show me more…)

Wednesday, July 18th, 2012

EU supporting Open Access

The EU is supporting Open Access too. 12431 scientists already signed the petition at http://www.thecostofknowledge.com by today!


(Show me more…)

Wednesday, July 4th, 2012

Add geolocation barcodes to travel guides, conference leaflets, etc please

There are so cute little files while I am constantly looking up addresses in travel guides, madly identifying them at google earth before transferring location bookmarks to my mobile devices.

Why can’t publishers produce just some small geo.kml or geo.rdf files, deposit them somewhere on their web server and link them with barcodes that are printed each time a geolocation is referred too (example link Groebenzell)?

The iPhone needs a slightly different form (without kml) as well as an app like i-nigma that is pointed by this barcode

QRCode

to maps://?geocode=&q=gr%C3%B6benzell&ie=UTF8&client=safari&oe=UTF-8&hnear=Gr%C3%B6benzell,+Oberbayern,+Bayern&gl=de&t=m&z=14”>Groebenzell.

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