{"id":15343,"date":"2020-02-10T06:00:44","date_gmt":"2020-02-10T06:00:44","guid":{"rendered":"http:\/\/www.wjst.de\/blog\/?p=15343"},"modified":"2022-12-02T09:09:27","modified_gmt":"2022-12-02T07:09:27","slug":"how-it-is-going-how-it-started-asthma-genome-wide-scans","status":"publish","type":"post","link":"https:\/\/www.wjst.de\/blog\/sciencesurf\/2020\/02\/how-it-is-going-how-it-started-asthma-genome-wide-scans\/","title":{"rendered":"How it is going, how it started &#8211; asthma genome wide scans"},"content":{"rendered":"<p>Here are the most recent GWAS data for asthma. Peaks are not identical peaks but quite similar.<\/p>\n<p>How it is going in 2021 &#8230;<\/p>\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC5901974\/\">PMC5901974<\/a><\/p>\n<p><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2022-02-06-um-06.32.13.jpg\" rel=\"key\" data-rel=\"key-image-0\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-19207 size-medium\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2022-02-06-um-06.32.13-620x346.jpg\" alt=\"\" width=\"620\" height=\"346\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2022-02-06-um-06.32.13-620x346.jpg 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2022-02-06-um-06.32.13-897x500.jpg 897w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2022-02-06-um-06.32.13-768x428.jpg 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2022-02-06-um-06.32.13.jpg 974w\" sizes=\"auto, (max-width: 620px) 100vw, 620px\" \/><\/a><\/p>\n<p><a href=\"http:\/\/big.stats.ox.ac.uk\/pheno\/biobank_22127\">big.stats.ox.ac.uk<\/a><\/p>\n<p><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-.png\" rel=\"key\" data-rel=\"key-image-1\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-15344 size-full\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-.png\" alt=\"\" width=\"1855\" height=\"624\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-.png 1855w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen--620x209.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen--1486x500.png 1486w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen--768x258.png 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen--1536x517.png 1536w\" sizes=\"auto, (max-width: 1855px) 100vw, 1855px\" \/><\/a><\/p>\n<p><a href=\"http:\/\/pheweb.sph.umich.edu\/SAIGE-UKB\/pheno\/495\">pheweb.sph.umich.edu<\/a><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5.png\" rel=\"key\" data-rel=\"key-image-2\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"key aligncenter wp-image-15367 size-full\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5.png\" alt=\"\" width=\"1554\" height=\"673\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5.png 1554w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5-620x269.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5-1155x500.png 1155w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5-768x333.png 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-5-1536x665.png 1536w\" sizes=\"auto, (max-width: 1554px) 100vw, 1554px\" \/><\/a><\/p>\n<p><a href=\"http:\/\/r2.finngen.fi\/pheno\/ASTHMA_CHILD_EXMORE\">r2.finngen.fi<\/a><\/p>\n<p><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1.png\" rel=\"key\" data-rel=\"key-image-3\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-15345 size-full\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1.png\" alt=\"\" width=\"1910\" height=\"805\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1.png 1910w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1-620x261.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1-1186x500.png 1186w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1-768x324.png 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-1-1536x647.png 1536w\" sizes=\"auto, (max-width: 1910px) 100vw, 1910px\" \/><\/a><\/p>\n<p><a href=\"https:\/\/www.ebi.ac.uk\/gwas\/efotraits\/EFO_0000270\">www.ebi.ac.uk<\/a><\/p>\n<p><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-2.png\" rel=\"key\" data-rel=\"key-image-4\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-15346 size-full\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-2.png\" alt=\"\" width=\"932\" height=\"629\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-2.png 932w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-2-620x418.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-2-741x500.png 741w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-2-768x518.png 768w\" sizes=\"auto, (max-width: 932px) 100vw, 932px\" \/><\/a><\/p>\n<p>&nbsp;<\/p>\n<p>And here is how it started 1986<\/p>\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/10333435\">third linkage scan (my PhD thesis)<\/a><br \/>\n<a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-4-1.png\" rel=\"key\" data-rel=\"key-image-5\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-18825 size-medium\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-4-1-620x439.png\" alt=\"\" width=\"620\" height=\"439\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-4-1-620x439.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-4-1-706x500.png 706w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-4-1-768x544.png 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/screen-4-1.png 1112w\" sizes=\"auto, (max-width: 620px) 100vw, 620px\" \/><\/a><\/p>\n<p><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/9090385\">second\u00a0 linkage scan (CSGA)<\/a><br \/>\n<a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27.png\" rel=\"key\" data-rel=\"key-image-6\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-15372 size-full\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27.png\" alt=\"\" width=\"2034\" height=\"634\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27.png 2034w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27-620x193.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27-1604x500.png 1604w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27-768x239.png 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.33.27-1536x479.png 1536w\" sizes=\"auto, (max-width: 2034px) 100vw, 2034px\" \/><\/a><\/p>\n<p><a href=\"https:\/\/www.nature.com\/articles\/383247a0\">first linkage scan (Cookson)<\/a><br \/>\n<a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.21.12.png\" rel=\"key\" data-rel=\"key-image-7\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"aligncenter wp-image-15371 size-full\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.21.12.png\" alt=\"\" width=\"1314\" height=\"1118\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.21.12.png 1314w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.21.12-620x528.png 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.21.12-588x500.png 588w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2020\/02\/Bildschirmfoto-2020-02-13-um-18.21.12-768x653.png 768w\" sizes=\"auto, (max-width: 1314px) 100vw, 1314px\" \/><\/a><\/p>\n<p>&nbsp;<\/p>\n<p>So, more than 2 decades ago we found hits on chromosome 2, 6, 9, 12 (missing\u00a0 chr17q21 where our marker coverage wasn&#8217;t probably good enough). It seems that this was the first identification of the IL33 region although<a href=\"https:\/\/doi.org\/10.1016\/j.immuni.2005.09.015\"> IL33 was described only 7 years later<\/a>. Remarkably,\u00a0 this result was possible with just 415\u00a0 individuals instead of 500,000 individuals nowadays (see also the asthma genetics <a href=\"https:\/\/www.wjst.de\/blog\/sciencesurf\/2017\/11\/timeline-asthma-allergy-genetics\/\">timeline<\/a>).<\/p>\n\n<p>&nbsp;<\/p>\n<div class=\"bottom-note\">\n  <span class=\"mod1\">CC-BY-NC Science Surf , accessed 15.04.2026<\/span>\n <\/div>","protected":false},"excerpt":{"rendered":"<p>Here are the most recent GWAS data for asthma. Peaks are not identical peaks but quite similar. How it is going in 2021 &#8230; PMC5901974 big.stats.ox.ac.uk pheweb.sph.umich.edu r2.finngen.fi www.ebi.ac.uk &nbsp; And here is how it started 1986 third linkage scan (my PhD thesis) second\u00a0 linkage scan (CSGA) first linkage scan (Cookson) &nbsp; So, more than &hellip; <a href=\"https:\/\/www.wjst.de\/blog\/sciencesurf\/2020\/02\/how-it-is-going-how-it-started-asthma-genome-wide-scans\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">How it is going, how it started &#8211; asthma genome wide scans<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[8,2],"tags":[3742],"class_list":["post-15343","post","type-post","status-publish","format-standard","hentry","category-asthma-allergy","category-genetics-biology","tag-key-biscayne"],"_links":{"self":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/15343","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/comments?post=15343"}],"version-history":[{"count":34,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/15343\/revisions"}],"predecessor-version":[{"id":21189,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/15343\/revisions\/21189"}],"wp:attachment":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/media?parent=15343"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/categories?post=15343"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/tags?post=15343"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}