{"id":22823,"date":"2023-11-04T15:28:20","date_gmt":"2023-11-04T13:28:20","guid":{"rendered":"https:\/\/www.wjst.de\/blog\/?p=22823"},"modified":"2023-11-04T20:43:28","modified_gmt":"2023-11-04T18:43:28","slug":"did-any-neanderthal-hominid-suffer-from-asthma","status":"publish","type":"post","link":"https:\/\/www.wjst.de\/blog\/sciencesurf\/2023\/11\/did-any-neanderthal-hominid-suffer-from-asthma\/","title":{"rendered":"Did the Neanderthal hominid suffer from asthma?"},"content":{"rendered":"<p>Maybe this is a largely irrelevant question &#8211;\u00a0 basically as relevant as building a <a href=\"https:\/\/www.neanderthal.de\/de\/start.html\">museum<\/a> on top of <a href=\"https:\/\/en.wikipedia.org\/wiki\/Neanderthal\">some Neanderthal 1 bones<\/a> &#8211; as we can never reliable predict a complex trait just by genetics and some broken bones.<\/p>\n<p>Already Virchow was wrong\u00a0 believing that the &#8220;Neanderthaler&#8221; was a modern human suffering from senility and malformations &#8230; Anyway, <a href=\"https:\/\/doi.org\/10.1101\/2023.10.30.564624\">new research<\/a> wants to answer this question:<\/p>\n<blockquote><p>Here we show that of the 51 asthma-associated loci that we surveyed, 39 carry variants that were derived in the Neanderthal lineage. The shared sequences suggest that some asthma variants may have originated from the Neanderthal genome after admixture and subsequent introgression into the Eurasian population. Of note, one variant, rs4742170, previously linked to asthma and childhood wheezing, was shown in a recent study to disrupt glucocorticoid receptor binding to a putative IL33 enhancer, and elevate enhancer activity of this key asthma gene.<\/p><\/blockquote>\n<p>Sorry to say that <a href=\"https:\/\/www.ebi.ac.uk\/gwas\/efotraits\/MONDO_0004979\">there are now &gt;3000 variants associated with asthma<\/a>\u00a0 including at least<a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC9722654\/\"> 354 coding variants\u00a0<\/a>while the authors used only 51 loci in their study derived from an outdated <a href=\"http:\/\/www.doi.org\/10.1513\/AnnalsATS.201507-459MG\">2016 review.<\/a> So we could already end up writing up a review here but\u00a0 the paper continues with omissions and misunderstandings<\/p>\n<div class=\"page\" title=\"Page 3\">\n<div class=\"layoutArea\">\n<div class=\"column\">\n<blockquote><p>most of the Neanderthal-derived SNPs we identified, including those near the lead variants for the asthma GWAS signals, are in non-coding regions of the gene<\/p><\/blockquote>\n<\/div>\n<p>Unfortunately we need to be exact here &#8211; not just &#8220;near&#8221; some variants. The SNP rs4742170 that they showed from the <a href=\"https:\/\/bioinf.eva.mpg.de\/jbrowse\/?loc=9%3A6242936..6242991&amp;tracks=hg19_1000g%2CAltai%2CSS6004475%2CSS6004468&amp;highlight=\">EVA database<\/a> had indeed the<a href=\"https:\/\/www.mdpi.com\/1422-0067\/19\/12\/3956\"> T allele<\/a> in the Vindija Neanderthal<\/p>\n<\/div>\n<\/div>\n<figure id=\"attachment_22830\" aria-describedby=\"caption-attachment-22830\" style=\"width: 620px\" class=\"wp-caption alignnone\"><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.11.11.jpg\" rel=\"key\" data-rel=\"key-image-0\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-22830 size-medium\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.11.11-620x380.jpg\" alt=\"\" width=\"620\" height=\"380\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.11.11-620x380.jpg 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.11.11.jpg 699w\" sizes=\"auto, (max-width: 620px) 100vw, 620px\" \/><\/a><figcaption id=\"caption-attachment-22830\" class=\"wp-caption-text\">https:\/\/bioinf.eva.mpg.de\/jbrowse\/?loc=9%3A6242936..6242991&amp;tracks=hg19_1000g%2Cvindija_hc_bam%2CAltai<\/figcaption><\/figure>\n<p>but unfortunately when going then to dbSNP it is also found in the African genome.<\/p>\n<figure id=\"attachment_22829\" aria-describedby=\"caption-attachment-22829\" style=\"width: 620px\" class=\"wp-caption alignnone\"><a href=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.00.24.jpg\" rel=\"key\" data-rel=\"key-image-1\" data-rl_title=\"\" data-rl_caption=\"\" title=\"\"><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-22829 size-medium\" src=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.00.24-620x226.jpg\" alt=\"\" width=\"620\" height=\"226\" srcset=\"https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.00.24-620x226.jpg 620w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.00.24-768x280.jpg 768w, https:\/\/www.wjst.de\/blog\/wp-content\/uploads\/2023\/11\/Bildschirmfoto-2023-11-04-um-14.00.24.jpg 1167w\" sizes=\"auto, (max-width: 620px) 100vw, 620px\" \/><\/a><figcaption id=\"caption-attachment-22829\" class=\"wp-caption-text\">https:\/\/www.ncbi.nlm.nih.gov\/snp\/?term=rs4742170<\/figcaption><\/figure>\n<p>So the whole conclusion<\/p>\n<div class=\"page\" title=\"Page 5\">\n<div class=\"layoutArea\">\n<div class=\"column\">\n<blockquote><p>Our findings here &#8230;\u00a0 add asthma to the list of diseases that could be traced back to Neanderthals<\/p><\/blockquote>\n<\/div>\n<\/div>\n<\/div>\n<p>is wrong.<\/p>\n\n<p>&nbsp;<\/p>\n<div class=\"bottom-note\">\n  <span class=\"mod1\">CC-BY-NC Science Surf , accessed 24.04.2026<\/span>\n <\/div>","protected":false},"excerpt":{"rendered":"<p>Maybe this is a largely irrelevant question &#8211;\u00a0 basically as relevant as building a museum on top of some Neanderthal 1 bones &#8211; as we can never reliable predict a complex trait just by genetics and some broken bones. Already Virchow was wrong\u00a0 believing that the &#8220;Neanderthaler&#8221; was a modern human suffering from senility and &hellip; <a href=\"https:\/\/www.wjst.de\/blog\/sciencesurf\/2023\/11\/did-any-neanderthal-hominid-suffer-from-asthma\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Did the Neanderthal hominid suffer from asthma?<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[8,2,6],"tags":[],"class_list":["post-22823","post","type-post","status-publish","format-standard","hentry","category-asthma-allergy","category-genetics-biology","category-joke-fun"],"_links":{"self":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/22823","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/comments?post=22823"}],"version-history":[{"count":8,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/22823\/revisions"}],"predecessor-version":[{"id":22834,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/22823\/revisions\/22834"}],"wp:attachment":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/media?parent=22823"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/categories?post=22823"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/tags?post=22823"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}