{"id":4175,"date":"2010-03-03T11:28:36","date_gmt":"2010-03-03T09:28:36","guid":{"rendered":"http:\/\/www.wjst.de\/blog\/?p=4175"},"modified":"2010-03-03T11:28:36","modified_gmt":"2010-03-03T09:28:36","slug":"sparse-coding-of-snpdisease-association","status":"publish","type":"post","link":"https:\/\/www.wjst.de\/blog\/sciencesurf\/2010\/03\/sparse-coding-of-snpdisease-association\/","title":{"rendered":"Sparse coding of SNP\/disease association"},"content":{"rendered":"<p>A new feature article in <a href=\"http:\/\/www.nature.com\/nature\/journal\/v463\/n7284\/full\/4631027a.html\">Nature about sparse coding<\/a> let me wonder if we could construct also some Waddington-like picture of the SNPxSNP landscape as well as a disease traits and apply such an algorithm to that picture. I did some research but didn&#8217;t find any example exploiting that idea; maybe it&#8217;s even more useful with the current shift to full genomes?<\/p>\n\n<p>&nbsp;<\/p>\n<div class=\"bottom-note\">\n  <span class=\"mod1\">CC-BY-NC Science Surf , accessed 17.04.2026<\/span>\n <\/div>","protected":false},"excerpt":{"rendered":"<p>A new feature article in Nature about sparse coding let me wonder if we could construct also some Waddington-like picture of the SNPxSNP landscape as well as a disease traits and apply such an algorithm to that picture. I did some research but didn&#8217;t find any example exploiting that idea; maybe it&#8217;s even more useful &hellip; <a href=\"https:\/\/www.wjst.de\/blog\/sciencesurf\/2010\/03\/sparse-coding-of-snpdisease-association\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Sparse coding of SNP\/disease association<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[2],"tags":[2613],"class_list":["post-4175","post","type-post","status-publish","format-standard","hentry","category-genetics-biology","tag-snp-association-analysis"],"_links":{"self":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/4175","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/comments?post=4175"}],"version-history":[{"count":4,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/4175\/revisions"}],"predecessor-version":[{"id":4183,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/posts\/4175\/revisions\/4183"}],"wp:attachment":[{"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/media?parent=4175"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/categories?post=4175"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.wjst.de\/blog\/wp-json\/wp\/v2\/tags?post=4175"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}