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Micro- and macroclimate factors certainly have more influence on our health than being reflected by current research. A new PLOS study now finds that

facilities built more than 50 years ago, characterised by large windows and high ceilings, had greater ventilation than modern naturally ventilated rooms (40 versus 17 air changes per hour) … Old-fashioned clinical areas with high ceilings and large windows provide greatest protection. Natural ventilation costs little and is maintenance free.

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CC-BY-NC Science Surf , accessed 28.07.2026

An update of the Barker hypothesis

Do you know the Barker hypothesis? It says that early life events may induce later disease. A new study in the Eur J Clin Nutr now reports

Children whose mothers had a 25(OH)-vitamin D concentration in pregnancy >75 nmol/l had an increased risk of eczema on examination at 9 months (OR 3.26, 95% CI 1.15â€"9.29, P=0.025) and asthma at age 9 years (OR 5.40, 95% CI, 1.09â€"26.65, P=0.038) compared to children whose mothers had a concentration of <30 nmol/l.

These are quite remarkable results. I wonder only why two forthcoming studies click + click using food frequency questionnaires will describe only a reduction of respiratory infection rates (which is not too bad in the context of the hygiene hypothesis) with no effects on allergy.

Food intake measures are probably not good enough for internal dose estimates as main source of vitamin D production is sunlight, isn´t it?

Addendum

12 March 2007 – the long awaited AJCN paper is now out. I have already feared that stratification by FFQ is only partially relevant. Indeed, the authors could have used also college graduate level which increased with intake catgeories 1-2-3-4 from 53-74-80-82% with all the problems by SES dependency (and not corrected for in model 2+3 in table 2 or model A…D in table 3). The discussion seems to be also far away from being an objective report on the immunology of vitamin D actions…

 

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Notes on asthma in Africa

I have just found our most recent PLOS paper about asthma in Africa being published online

As of the 1980s, there was an overall conviction that asthma had an anthropogenic origin with indoor and outdoor air pollution as the main culprits. Following some overinterpreted epidemiological findings of the “hygienic” phase, there is now evidence accumulating that the asthma epidemic might have an iatrogenic origin. There might not only be indirect effects of improved living standards and better medical care, there are even direct effects under discussion, for example by oestrogens, vitamin D, antibiotics, and paracetamol. Infant formula (which contains vitamin D) has already entered the food chain in Africa; paracetamol is the most common drug bought over the counter in Ghana. Do African countries offer any unique observations where singular effects of these drugs can be delineated?

An independent review (that I did not know at time of writing) arrived at similar conclusions. We all, however, forgot to mention sensational news as Gambian president Yahya Jammeh can heal asthma clickclick – a more serious appraisal click.

My childhood favorites
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Undocumented Thunderbird function – help needed

For documenting a research project I want to insert quick links to previous emails. Clicking a link should kickstart Thunderbird and go directly to a known message. Mozilla.org says

Athough Google desktop is able to do it, there is no clear API to instruct Thunderbird to display a given email stored in its mail box (knowing the folder & message ID)

Here is how Google Desktop Search (GDS) links to an email

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What I have found out so far by comparing different links

(1) is the fixed parameter relating to my hard disk??
(2) is a variable parameter relating to the physical location of my \daten\Mail\thunderbird\imap\INBOX file??
(3) is the unique Message-ID that may be seen in Thunderbird with the View Header plugin
(4) the variable salt/seed value that is stored in the registry at HKEY_CURRENT_USER\\Google\\CustomSearch\\Google Desktop Search\\Url which may be retrieved with a 2 line perl script.

So I am ready to construct URLs that link to an email by using GDS. This is, however, not very elegant. Isn’t there any other way (maybe by a Thunderbird extension) to construct and follow links directly to emails? Can somebody trace with Sysinternals Process Explorer what GDS spits out and follow it up at XUL planet ?

 

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Dual vitamin D effects on type 1 diabetes and allergy

Early vitamin D supplementation may have dual effects, protecting against type 1 diabetes and inducing allergy. Is that possible? Yes, individual genes variants may determine the outcome.

In addition to HLA the most prominent type 1 diabetes genes are INS – CTLA4 – PTPN22 – CD25 – IF1H1, the most prominent asthma/allergy genes ADAM33 – DPP10 – IL12 – IL4 – GPR154 – FLG. I can´t see any joint master regulator, however, we know that

Could that be a model to explain the dual involvement of vitamin D in both diseases?

 

CC-BY-NC Science Surf , accessed 28.07.2026

Computer names, sequencer names, freezer names

Creativity in science – look how computer are being named (seemed there are many da Vinicis and Picassos in bioinformatics). The MDC microsatellite center in Berlin named their sequencers by volcanos (even before pyrosequencing became in vogue), we use European cities for our freezers. Famous chess players would be another idea or use car brands …

 

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At its heart

43 folders writes:

Remember that your blog is only incidentally a publishing system or a public website. At its heart, your blog represents the evolving expression of your most passionately held ideas. It’s a conversation you’re holding up with the world and with yourself â€" a place where you can watch your own thoughts take different shapes and occasionally surprise you with where they end up…

wow – couldn’t say that in a better way.

 

CC-BY-NC Science Surf , accessed 28.07.2026

Something in the air

New studies further question the hygiene hypothesis of allergy induction. One study shows that a household bacterial elimination strategy does not lead to more — it even leads to less asthma.

Children living in a house regularly cleaned with bleach were less likely to have asthma (OR, 0.10; CI, 0.02-0.51), eczema (OR, 0.22; CI, 0.06-0.79) and of being sensitized to indoor aeroallergens (OR, 0.53; CI, 0.27-1.02)

Another study, by designing a 16S rRNA chip, examined a snapshot of urban air in San Antonio — the aerosol harbored at least 1,800 diverse bacterial types

a richness approaching that of some soil bacterial communities

You probably know the joke that before taking a deep breath think where the air has been before…

Addendum

The ecology of human skin has now been also reported – highly diverse, well conserved but low-level interpersonal consensus: scienceblog:doi:10.1073/pnas.0607077104

 

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Flip-Flop

The AJHG discusses an interesting phenomenon that I noticed too. While replicating a disease marker association the risk allele suddenly reversed which led me believe that there was an error in allele coding. As the authors of this new paper now show these flip-flop association may indeed a true positive association to a non causal variant.

 

CC-BY-NC Science Surf , accessed 28.07.2026

Delusion or poor scientific hypothesis

Delusion is a common symptom of paranoid schizophrenia ICD10 F20.0, usually combined with hallucinations (either auditory – noises or voices, visual or other perceptions of smell or taste). The most common paranoid symptoms are delusions of persecution, reference, exalted birth, special mission, bodily change, or jealousy. It has been most impressing (and harrowing) to see these patients as a medical student in Vienna at Baumgartner Höhe. Of course I visited Berggasse 19 but there have been more pioneers in Vienna like Krafft-Ebing).

We are arriving now at my main question: What is the difference between delusion and a scientific hypothesis? This question stems from a recent appraisal of the “TH17 revision” of the TH1/TH2 hypothesis by Lawrence Steinman

A historical perspective on the TH1/TH2 hypothesis is illuminating, both for its insights into important immunological phenomena and for its revelations about how groups of highly trained intellectuals, in this case immunologists, can adhere to an idea for so many years, even in the face of its obvious flaws.

He refers mainly to predictions of EAE outcomes – as an allergologist I could add more examples where the simple TH1/TH2 paradigma did not work. What is the difference between delusion and a scientific hypothesis? In my opinion the answer is context dependent as there is not so much difference – delusion will not be so persistent over time (although it is nearly impossible to convince somebody that he is captured by a delusion) while a poor hypothesis is usually more persistent (but there is a good chance to convince somebody that a hypothesis is wrong). Steinman also has some advice

We should not become fixated on the hypothesis, as if it were a ‘Law’, which in any case may fall in the face of new data that such a Law cannot explain. Most importantly, we should not ignore aberrant data that cannot be explained by a concept, whether it is deemed a Law or, more modestly, a Hypothesis. We should always be careful to explain those quirky aberrant points in the data and those annoying blemishes and flaws in the scientific theory. They may be hiding a tremendous new insight.

 

CC-BY-NC Science Surf , accessed 28.07.2026

Ab initio creata sum

Hymne an das Ewig-Weibliche / 19. â€" 25. März 1918 – Verzy / Teilhard de Chardin / An Beatrix / Ab initio creata sum…(Proverbs 8:22)

Seit Weltbeginn bin ich erschienen. Vor den Ewen (Äonen) ging ich hervor aus Gottes Händen â€" umrißhaft, um im Gang der Zeit an Schönheit zu gewinnen, Mitwirkerin seines Werkes.
Alles im Universum erfolgt durch Vereinigung und Befruchtung â€" durch Zusammenschluß der Elemente, die zueinander suchen, paarweise verschmelzen und neugeboren werden in einem Dritten.
Gott hat mich in das ursprüngliche Viele hinein ergossen als die Kraft, die verdichtet und den Dingen zu ihrer Mitte verhilft.
Ich bin das einigende Antlitz der Seienden â€" bin der Duft, der sie herbeilockt und sie in Freiheit und Leidenschaft mitzieht auf den Weg ihrer Einigung.
Durch mich gerät alles in Bewegung und ordnet sich zueinander.
Ich bin der Zauber, der in die Welt gemischt ist, auf daß sie sich sammle â€" das über ihr schwebende Ideal, auf daß sie emporsteige.
Ich bin das wesenhaft Weibliche.

Teilhard de Chardin was one of the few theologians who had also a sound scientific background. He worked in the paleontology laboratory of the Musée National d’Histoire Naturelle; in 1913 he took part in excavations in the prehistoric painted caves in the northwest of Spain – more information at

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His verses reminds me to Jeremiah 1:5 who already expressed 628 BC a clear view of our pre-existence: Before I formed thee in the belly I knew thee; and before thou camest forth out of the womb I sanctified thee. Is there really so much difference to what we currently believe about meiotic events?

 

CC-BY-NC Science Surf , accessed 28.07.2026

Meeting abstract versus full paper

JACI has an interesting letter comparing the number of meeting abstracts and the subsequent publication of a full paper. It seems that there is a large variation from from 11% to 78% – does this really mean that at some meetings half of the talks is not worth to write them up? This would explain why at some conferences nobody is taking notes – I am usually playing sudoku, backgammon or go but have also interesting podcasts with me.

 

CC-BY-NC Science Surf , accessed 28.07.2026

Say no

German Ärzteblatt has some important suggestions “Mehr Mut zum Nein-sagen” how the German healthcare system may be improved. In brief,
(1) patients need to be empowered to make their own health decision – Norwegians have on average only 3 but Germans 16 physician contacs per year
(2) during professional contact patients need more trust in doctor, nurse, pharmacist and physical therapist
(3) more money for the ill, less for the health people

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CC-BY-NC Science Surf , accessed 28.07.2026